

| Directory | Changes | Lines of Code | Lines per Change |
|---|---|---|---|
| Totals | 372 (100.0%) | 10854 (100.0%) | 29.1 |
| mrUtilities/mrFlatMesh/ | 44 (11.8%) | 2304 (21.2%) | 52.3 |
| mrUtilities/ImageProcessing/ | 30 (8.1%) | 2283 (21.0%) | 76.1 |
| mrLoadRet/File/ | 43 (11.6%) | 1562 (14.4%) | 36.3 |
| mrLoadRet/Analysis/MotionComp/ | 23 (6.2%) | 1046 (9.6%) | 45.4 |
| mrLoadRet/Analysis/ | 20 (5.4%) | 808 (7.4%) | 40.4 |
| mrUtilities/surfUtils/ | 73 (19.6%) | 525 (4.8%) | 7.1 |
| mrLoadRet/Edit/ | 4 (1.1%) | 459 (4.2%) | 114.7 |
| mrLoadRet/GUI/ | 41 (11.0%) | 420 (3.9%) | 10.2 |
| mrUtilities/File/FreeSurfer/ | 6 (1.6%) | 406 (3.7%) | 67.6 |
| mrLoadRet/Analysis/ConcatTSeries/ | 8 (2.2%) | 232 (2.1%) | 29.0 |
| mrLoadRet/Analysis/AverageTSeries/ | 3 (0.8%) | 186 (1.7%) | 62.0 |
| mrUtilities/File/Nifti/ | 11 (3.0%) | 149 (1.4%) | 13.5 |
| mrLoadRet/Analysis/EventRelated/ | 7 (1.9%) | 149 (1.4%) | 21.2 |
| mrLoadRet/ROI/ | 7 (1.9%) | 148 (1.4%) | 21.1 |
| mrLoadRet/Plot/ | 9 (2.4%) | 66 (0.6%) | 7.3 |
| mrLoadRet/View/ | 10 (2.7%) | 50 (0.5%) | 5.0 |
| mrUtilities/File/ | 4 (1.1%) | 24 (0.2%) | 6.0 |
| mrUtilities/MatlabUtilities/ | 8 (2.2%) | 14 (0.1%) | 1.7 |
| mrLoadRet/Analysis/CorAnal/ | 4 (1.1%) | 11 (0.1%) | 2.7 |
| mrLoadRet/ | 8 (2.2%) | 11 (0.1%) | 1.3 |
| mrLoadRet/Analysis/QuickAnalysis/ | 1 (0.3%) | 1 (0.0%) | 1.0 |
| mrAlign/ | 8 (2.2%) | 0 (0.0%) | 0.0 |

fileparts no longer returns the fourth argument (ver) in the current version of matlab
1 lines of code changed in 1 file:
Removed the fourth output, VERSN, of FILEPARTS because it will be removed in a future release of matlab.
3 lines of code changed in 1 file:
removed the fourth output, VERNS, of FILEPARTS because it will be removed in a future release
1 lines of code changed in 1 file:
when updating the current scan around line 333, update to the first scan if multiple scans were passed
1 lines of code changed in 1 file:
added call to help if no input arguments
8 lines of code changed in 1 file:
print out help if called with no arguments
6 lines of code changed in 1 file:
103 lines of code changed in 1 file:
specify the groupNum for the Concat group in call to mrDispOverlay
104 lines of code changed in 1 file:
modified call to fileparts on line 35 b/c the fourth output, VERSN, of FILEPARTS will be removed in a future release.
3 lines of code changed in 1 file:
changed the call to fileparts on line 35 to only have three outputs, since fourth output, VERSN, of FILEPARTS will be removed in a future release.
1 lines of code changed in 1 file:
fixed small bug (the coordinates for the points were X/Y flipped)
9 lines of code changed in 1 file:
I've been testing with Matlab7.9 and Mac OSX 10.6 and I believe everything is okay.
1 lines of code changed in 1 file:
removed a stray ctranspose (') from a callback function (@mlrDisplayEPIdeselectAll) on line 119
3 lines of code changed in 1 file:
Added an option to import both right and left hemisphere surfaces. If bothHemiFlag is set to 1, then the function loads the inner and outer surfaces for both hemispheres, concatenates them together, and creates a single baseAnat with both hemispheres. Having both hemispheres loaded up in MLR is convenient for data viewing and it makes extending/restricting ROI's easier when the ROI exists in both hemispheres. Still need to add a hook in MLR GUI to make bothHemiFlag an option.
96 lines of code changed in 1 file:
Added C functions from Eero Simoncelli pyramid toolbox (http://www.cns.nyu.edu/~lcv/software.php) needed to compile corrDn.c Also added a Makefile, which has only been tested on Mac OS X.
1337 lines of code changed in 5 files:
pass 'sliceTimes' to motionCompPreprocessing when preprocessing both the base scan and the target scans
1 lines of code changed in 1 file:
pass sliceTimes to motionCompPrepressoing
2 lines of code changed in 1 file:
pass in sliceTimes, rather than getting them from the view
2 lines of code changed in 1 file:
fixing a munched mexfile
0 lines of code changed in 4 files:
fixing a munched mexfile
0 lines of code changed in 6 files:
(200 more)